biojava - Java framework for processing biological data

Property Value
Distribution RPM Universal
Repository JPackage 6.0 all
Package name biojava
Package version 1.7.1
Package release 1.jpp6
Package architecture noarch
Package type rpm
Installed size 3.45 MB
Download size 3.10 MB
Official Mirror
BioJava is an open-source project dedicated to providing a Java framework for
processing biological data. It provides analytical and statistical routines,
parsers for common file formats and allows the manipulation of sequences and 3D
structures. The goal of the biojava project is to facilitate rapid application
development for bioinformatics.


Package Version Architecture Repository
biojava - - -


Name Value
bytecode -
commons-cli -
commons-collections -
commons-dbcp -
commons-pool -
hsqldb -
jgrapht -
jpackage-utils -


Name Value
biojava = 1.7.1-1.jpp6


Type URL
Binary Package biojava-1.7.1-1.jpp6.noarch.rpm
Source Package biojava-1.7.1-1.jpp6.src.rpm

Install Howto

Fedora, CentOS, RHEL:
  1. Download latest jpackage-release rpm from
  2. Install jpackage-release rpm:
    # rpm -Uvh jpackage-release*rpm
  3. Install biojava rpm package:
    # yum install biojava
  1. Add the JPackage 6.0 repository:
    # zypper addrepo jpackage-6.0
  2. Install biojava rpm package:
    # zypper install biojava
Mandriva, Mageia:
  1. Add the JPackage 6.0 repository:
    # urpmi.addmedia jpackage-6.0 with
  2. Update packages list:
    # urpmi.update -a
  3. Install biojava rpm package:
    # urpmi biojava




2010-12-08 - David Walluck <> 0:1.7.1-1
- 1.7.1
2009-09-21 - David Walluck <> 0:1.7-1
- release

See Also

Package Description
biojava-apps-1.7.1-1.jpp6.noarch.rpm Apps for biojava
biojava-apps-javadoc-1.7.1-1.jpp6.noarch.rpm Javadoc for biojava-apps
biojava-demos-1.7.1-1.jpp6.noarch.rpm Demos for biojava
biojava-demos-javadoc-1.7.1-1.jpp6.noarch.rpm Javadoc for biojava-demos
biojava-javadoc-1.7.1-1.jpp6.noarch.rpm Javadoc for biojava
bnd1-1.43.0-1.jpp6.noarch.rpm BND OSGi bundle tools
bndtask-0.2.0-1.jpp6.noarch.rpm OSGi bundle ant task
boilerpipe-1.1.0-1.jpp6.noarch.rpm Fulltext Extraction from HTML
boilerpipe-javadoc-1.1.0-1.jpp6.noarch.rpm Javadoc for boilerpipe
bonecp-0.8.0-1.jpp6.noarch.rpm BoneCP JDBC pool
bonecp-javadoc-0.8.0-1.jpp6.noarch.rpm Javadoc for bonecp
bouncycastle-1.46-4.jpp6.noarch.rpm Bouncy Castle Crypto Package for Java
bouncycastle-javadoc-1.46-4.jpp6.noarch.rpm Javadoc for bouncycastle
brazil-2.3-9.jpp6.noarch.rpm Extremely small footprint Java HTTP stack
brazil-demo-2.3-9.jpp6.noarch.rpm Demos for brazil